Transcript: FILNC1:17

Basic information

LNCipedia transcript ID: FILNC1:17 
LNCipedia gene ID: FILNC1
Location (hg19): chr6:140160821-140163003
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2183 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231426.1|FTMT22400010764.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -75.7574 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FILNC1:17 no no no no

Available literature

  1. Xiao (2017), Energy stress-induced lncRNA FILNC1 represses c-Myc-mediated energy metabolism and inhibits renal tumor development., Nat Commun


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HECA-2:10
5.0 lnc-HECA-2:10
5.1 FILNC1:7
5.2 FILNC1:17