Transcript: FLG-AS1:11

Basic information

LNCipedia transcript ID: FLG-AS1:11 
HGNC Gene Symbol: FLG-AS1    
HGNC Full Gene Name: FLG antisense RNA 1
Ensembl Gene ID: ENSG00000237975
Ensembl Transcript ID: ENST00000628475
Location (hg19): chr1:152338228-152380560
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 497 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000628475.2
Alternative gene names: ENSG00000237975.6; FLG-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -136.6926 non-coding 
CPAT coding probability 2.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FLG-AS1:11 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 FLG-AS1:11
4.1 FLG-AS1:11
5.0 FLG-AS1:11
5.1 FLG-AS1:11
5.2 FLG-AS1:11