Transcript: FLG-AS1:2

Basic information

LNCipedia transcript ID: FLG-AS1:2 
HGNC Gene Symbol: FLG-AS1    
HGNC Full Gene Name: FLG antisense RNA 1
Ensembl Gene ID: ENSG00000237975
Ensembl Transcript ID: ENST00000420707
Location (hg19): chr1:152161827-152313586
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 906 bp
Exons: 9
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000420707; ENST00000420707.1; FLG-AS1-003; OTTHUMT00000033745.2; NONHSAT006468; ENST00000420707.5
Alternative gene names: ENSG00000237975; RP1-14N1.2; ENSG00000237975.1; FLG-AS1; OTTHUMG00000012203.2; ENSG00000237975.2; ENSG00000237975.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.7051 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FLG-AS1:2 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LCE5A-1:1
3.1 lnc-LCE5A-2:1
4.0 FLG-AS1:2
4.1 FLG-AS1:2
5.0 FLG-AS1:2
5.1 FLG-AS1:2
5.2 FLG-AS1:2