Transcript: FLG-AS1:20

Basic information

LNCipedia transcript ID: FLG-AS1:20 
LNCipedia gene ID: FLG-AS1
Location (hg19): chr1:152161306-152339252
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6866 bp
Exons: 9
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237975.2|MICT00000021068.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.243 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FLG-AS1:20 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 FLG-AS1:20
5.0 FLG-AS1:20
5.1 FLG-AS1:20
5.2 FLG-AS1:20