Transcript: FLG-AS1:28

Basic information

LNCipedia transcript ID: FLG-AS1:28 
LNCipedia gene ID: FLG-AS1
Location (hg19): chr1:152177537-152179658
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1340 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT006473; FPKM1_group_1489_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.5759 non-coding 
CPAT coding probability 0.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FLG-AS1:28 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LCE5A-3:2
4.0 lnc-LCE5A-3:2
4.1 FLG-AS1:28
5.0 FLG-AS1:28
5.1 FLG-AS1:28
5.2 FLG-AS1:28