Transcript: FLG-AS1:7

Basic information

LNCipedia transcript ID: FLG-AS1:7 
LNCipedia gene ID: FLG-AS1
Location (hg19): chr1:152309544-152339163
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2852 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000445097; ENST00000445097.1; FLG-AS1-002; OTTHUMT00000033744.1
Alternative gene names: ENSG00000237975; RP1-14N1.2; ENSG00000237975.1; FLG-AS1; OTTHUMG00000012203.2; ENSG00000237975.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -107.2116 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FLG-AS1:7 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LCE5A-1:4
3.1 lnc-LCE5A-2:4
4.0 FLG-AS1:7
4.1 FLG-AS1:7
5.0 FLG-AS1:7
5.1 FLG-AS1:7
5.2 FLG-AS1:7