Transcript: FOXCUT:10
Basic information
LNCipedia transcript ID: FOXCUT:10
HGNC Gene Symbol: FOXCUT
HGNC Full Gene Name:
FOXC1 upstream transcript
Ensembl Gene ID:
ENSG00000280916
Ensembl Transcript ID:
ENST00000628509
Location (hg19): chr6:1605766-1606314
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 333 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000628509.1
Alternative gene names: ENSG00000280916.1; FOXCUT
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| FOXCUT:10 | no | no | no | no |
Available literature
- Kong (2014), The expression and functional role of a FOXC1 related mRNA-lncRNA pair in oral squamous cell carcinoma., Mol. Cell. Biochem.
- Pan (2014), A novel long non-coding RNA FOXCUT and mRNA FOXC1 pair promote progression and predict poor prognosis in esophageal squamous cell carcinoma., Int J Clin Exp Pathol
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 4.0 | lnc-FOXC1-1:4 |
| 4.1 | lnc-FOXC1-1:4 |
| 5.0 | lnc-FOXC1-1:4 |
| 5.1 | FOXCUT:5 |
| 5.2 | FOXCUT:10 |