Transcript: FOXP1-AS1:2

Basic information

LNCipedia transcript ID: FOXP1-AS1:2 
LNCipedia gene ID: FOXP1-AS1
Location (hg19): chr3:71338908-71359918
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 905 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT090398
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -163.3181 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FOXP1-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR27-4:3
4.0 FOXP1-AS1:2
4.1 FOXP1-AS1:2
5.0 FOXP1-AS1:2
5.1 FOXP1-AS1:2
5.2 FOXP1-AS1:2