Transcript: FOXP1-AS1:3

Basic information

LNCipedia transcript ID: FOXP1-AS1:3 
LNCipedia gene ID: FOXP1-AS1
RefSeq ID: NR_126463
Location (hg19): chr3:71338909-71355005
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 712 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126463; NR_126463.1
Alternative gene names: ; FOXP1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.1435 non-coding 
CPAT coding probability 0.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FOXP1-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR27-4:6
4.0 FOXP1-AS1:3
4.1 FOXP1-AS1:3
5.0 FOXP1-AS1:3
5.1 FOXP1-AS1:3
5.2 FOXP1-AS1:3