Transcript: FRMD6-AS1:1

Basic information

LNCipedia transcript ID: FRMD6-AS1:1 
LNCipedia gene ID: FRMD6-AS1
Location (hg19): chr14:52116236-52118462
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2227 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT036856; NR_037676
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.5193 non-coding 
CPAT coding probability 5.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FRMD6-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-463J10.2.1-5:1
4.0 FRMD6-AS1:1
4.1 FRMD6-AS1:1
5.0 FRMD6-AS1:1
5.1 FRMD6-AS1:1
5.2 FRMD6-AS1:1