Transcript: FRY-AS1:10

Basic information

LNCipedia transcript ID: FRY-AS1:10 
LNCipedia gene ID: FRY-AS1
RefSeq ID: NR_103839
Location (hg19): chr13:32598183-32605776
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2383 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_103839.1
Alternative gene names: FRY-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -26.6918 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FRY-AS1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 FRY-AS1:10
5.1 FRY-AS1:10
5.2 FRY-AS1:10