Transcript: FZD10-DT:55

Basic information

LNCipedia transcript ID: FZD10-DT:55 
LNCipedia gene ID: FZD10-DT
Location (hg19): chr12:130606749-130635314
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2409 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020998; NONHSAT031954
Alternative gene names: XLOC_010262; linc-TMEM132D-3; FLJ31485


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.7116 non-coding 
CPAT coding probability 6.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FZD10-DT:55 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RIMBP2-4:12
3.1 lnc-TMEM132D-3:12
4.0 FZD10-AS1:15
4.1 FZD10-AS1:15
5.0 FZD10-AS1:15
5.1 FZD10-DT:28
5.2 FZD10-DT:55