Transcript: GAS6-AS1:5

Basic information

LNCipedia transcript ID: GAS6-AS1:5 
LNCipedia gene ID: GAS6-AS1
Location (hg19): chr13:114545293-114548719
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3427 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT035382
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.751 non-coding 
CPAT coding probability 55.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GAS6-AS1:5 yes no no no

Available literature

  1. Han (2013), Low expression of long noncoding RNA GAS6-AS1 predicts a poor prognosis in patients with NSCLC., Med. Oncol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM70B-1:4
4.0 GAS6-AS1:5
4.1 GAS6-AS1:5
5.0 GAS6-AS1:5
5.1 GAS6-AS1:5
5.2 GAS6-AS1:5