Transcript: GAS6-DT:21

Basic information

LNCipedia transcript ID: GAS6-DT:21 
LNCipedia gene ID: GAS6-DT
Location (hg19): chr13:114567913-114569536
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1521 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021919; NONHSAT035387
Alternative gene names: XLOC_010514; linc-CDC16-5; FLJ44054


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.28 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GAS6-DT:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM70B-1:3
3.1 lnc-FAM70B-2:3
4.0 GAS6-AS2:5
4.1 GAS6-AS2:5
5.0 GAS6-AS2:5
5.1 GAS6-DT:11
5.2 GAS6-DT:21