Transcript: GCC2-AS1:10

Basic information

LNCipedia transcript ID: GCC2-AS1:10 
LNCipedia gene ID: GCC2-AS1
Location (hg19): chr2:109123971-109150657
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 563 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214184.3|ENST00000322353.3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -118.3052 non-coding 
CPAT coding probability 2.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GCC2-AS1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 GCC2-AS1:10
5.0 GCC2-AS1:10
5.1 GCC2-AS1:10
5.2 GCC2-AS1:10