Transcript: GHET1:6

Basic information

LNCipedia transcript ID: GHET1:6 
LNCipedia gene ID: GHET1
Location (hg19): chr7:148684668-148687584
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2917 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000202354.1|HBMT00001327866.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.1462 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GHET1:6 no no no no

Available literature

  1. Yang (2014), Long non-coding RNA GHET1 promotes gastric carcinoma cell proliferation by increasing c-Myc mRNA stability., FEBS J.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF398-4:2
5.0 lnc-ZNF398-4:2
5.1 GHET1:4
5.2 GHET1:6