Transcript: GLIDR:13

Basic information

LNCipedia transcript ID: GLIDR:13 
LNCipedia gene ID: GLIDR
Location (hg19): chr9:41952715-41955031
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1478 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000355952; NONHSAT131271
Alternative gene names: ENSG00000204836; BX664615.1; MGC21881; TCONS_00015562


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 114.6762 coding 
CPAT coding probability 21.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GLIDR:13 no no no no

Available literature

  1. Zhang (2017), Increased expression of long non-coding RNA GLIDR in prostate cancer., Cancer Biomark
  2. Zhang (2013), A long non-coding RNA signature in glioblastoma multiforme predicts survival., Neurobiol. Dis.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM75A4-2:2
3.1 lnc-FAM75A4-2:2
4.0 GLIDR:13
4.1 GLIDR:13
5.0 GLIDR:13
5.1 GLIDR:13
5.2 GLIDR:13