Transcript: GLIDR:15

Basic information

LNCipedia transcript ID: GLIDR:15 
LNCipedia gene ID: GLIDR
Location (hg19): chr9:41948828-41954891
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 551 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT131269
Alternative gene names: MGC21881; TCONS_00015562


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 89.7512 coding 
CPAT coding probability 6.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GLIDR:15 no no no no

Available literature

  1. Zhang (2017), Increased expression of long non-coding RNA GLIDR in prostate cancer., Cancer Biomark
  2. Zhang (2013), A long non-coding RNA signature in glioblastoma multiforme predicts survival., Neurobiol. Dis.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM75A4-2:7
4.0 GLIDR:15
4.1 GLIDR:15
5.0 GLIDR:15
5.1 GLIDR:15
5.2 GLIDR:15