Transcript: GLIDR:4

Basic information

LNCipedia transcript ID: GLIDR:4 
LNCipedia gene ID: GLIDR
RefSeq ID: NR_126045
Location (hg19): chr9:41952706-41955177
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1633 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126045; NR_126045.1
Alternative gene names: MGC21881; TCONS_00015562; GLIDR


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 114.6762 coding 
CPAT coding probability 21.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GLIDR:4 no no no no

Available literature

  1. Zhang (2017), Increased expression of long non-coding RNA GLIDR in prostate cancer., Cancer Biomark
  2. Zhang (2013), A long non-coding RNA signature in glioblastoma multiforme predicts survival., Neurobiol. Dis.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM75A4-2:9
4.0 GLIDR:4
4.1 GLIDR:4
5.0 GLIDR:4
5.1 GLIDR:4
5.2 GLIDR:4