Transcript: GRM7-AS1:2

Basic information

LNCipedia transcript ID: GRM7-AS1:2 
HGNC Gene Symbol: GRM7-AS1    
HGNC Full Gene Name: GRM7 antisense RNA 1
Ensembl Gene ID: ENSG00000236202
Ensembl Transcript ID: ENST00000420230
RefSeq ID: NR_046606
Location (hg19): chr3:7561428-7576971
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 430 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000420230.1; GRM7-AS1-001; OTTHUMT00000337695.1; NONHSAT087697; NR_046606; NR_046606.1
Alternative gene names: ENSG00000236202.1; GRM7-AS1; OTTHUMG00000154932.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -149.9808 non-coding 
CPAT coding probability 3.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GRM7-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf32-5:2
4.0 GRM7-AS1:2
4.1 GRM7-AS1:2
5.0 GRM7-AS1:2
5.1 GRM7-AS1:2
5.2 GRM7-AS1:2