Transcript: HCG21:4

Basic information

LNCipedia transcript ID: HCG21:4 
LNCipedia gene ID: HCG21
Location (hg19): chr6:30921871-30923449
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 265 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT108706
Alternative gene names: AB023048.2; NCRNA00150


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -102.4077 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HCG21:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SFTA2-3:4
4.0 HCG21:4
4.1 HCG21:4
5.0 HCG21:4
5.1 HCG21:4
5.2 HCG21:4