Transcript: HHATL-AS1:3

Basic information

LNCipedia transcript ID: HHATL-AS1:3 
HGNC Gene Symbol: HHATL-AS1    
HGNC Full Gene Name: HHATL antisense RNA 1
Ensembl Gene ID: ENSG00000230970
Ensembl Transcript ID: ENST00000600839
Location (hg19): chr3:42744203-42748268
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 833 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000600839.2
Alternative gene names: ENSG00000230970.3; HHATL-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -57.8873 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HHATL-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 HHATL-AS1:3
4.1 HHATL-AS1:3
5.0 HHATL-AS1:3
5.1 HHATL-AS1:3
5.2 HHATL-AS1:3