Transcript: HLA-F-AS1:10

Basic information

LNCipedia transcript ID: HLA-F-AS1:10 
LNCipedia gene ID: HLA-F-AS1
Location (hg19): chr6:29694446-29694916
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 471 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT108545
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.4308 non-coding 
CPAT coding probability 38.62% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
HLA-F-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZFP57-7:7
4.0 HLA-F-AS1:10
4.1 HLA-F-AS1:10
5.0 HLA-F-AS1:10
5.1 HLA-F-AS1:10
5.2 HLA-F-AS1:10