Transcript: HLX-AS1:4

Basic information

LNCipedia transcript ID: HLX-AS1:4 
LNCipedia gene ID: HLX-AS1
Location (hg19): chr1:221051350-221053593
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1335 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000257551.1|HBMT00000086282.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 228.9569 coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
HLX-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 HLX-AS1:4
5.0 HLX-AS1:4
5.1 HLX-AS1:4
5.2 HLX-AS1:4