Transcript: HTR2A-AS1:1

Basic information

LNCipedia transcript ID: HTR2A-AS1:1 
LNCipedia gene ID: HTR2A-AS1
RefSeq ID: NR_103752
Location (hg19): chr13:47426275-47430434
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 297 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT033668; NR_103752; NR_103752.1
Alternative gene names: ; HTR2A-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HTR2A-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRCH1-4:4
4.0 HTR2A-AS1:1
4.1 HTR2A-AS1:1
5.0 HTR2A-AS1:1
5.1 HTR2A-AS1:1
5.2 HTR2A-AS1:1