Transcript: HYI-AS1:1

Basic information

LNCipedia transcript ID: HYI-AS1:1 
HGNC Gene Symbol: HYI-AS1    
HGNC Full Gene Name: HYI antisense RNA 1
Ensembl Gene ID: ENSG00000229348
Ensembl Transcript ID: ENST00000444386
Location (hg19): chr1:43919598-43922666
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 545 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000444386.1; HYI-AS1-001; OTTHUMT00000019729.1; NONHSAT002810
Alternative gene names: ENSG00000229348.1; HYI-AS1; OTTHUMG00000007503.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.7756 non-coding 
CPAT coding probability 1.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HYI-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SZT2-1:1
4.0 HYI-AS1:1
4.1 HYI-AS1:1
5.0 HYI-AS1:1
5.1 HYI-AS1:1
5.2 HYI-AS1:1