Transcript: HYMAI:2

Basic information

LNCipedia transcript ID: HYMAI:2 
LNCipedia gene ID: HYMAI
Location (hg19): chr6:144263762-144385648
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 296 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT115366
Alternative gene names: NCRNA00020


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -307.9304 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HYMAI:2 no no no no

Available literature

  1. Wang (2015), Multidrug-Resistance Related Long Non-Coding RNA Expression Profile Analysis of Gastric Cancer., PLoS ONE
  2. Arima (2000), A novel imprinted gene, HYMAI, is located within an imprinted domain on human chromosome 6 containing ZAC., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SF3B5-2:6
4.0 HYMAI:2
4.1 HYMAI:2
5.0 HYMAI:2
5.1 HYMAI:2
5.2 HYMAI:2