Transcript: IDH1-AS1:1

Basic information

LNCipedia transcript ID: IDH1-AS1:1 
LNCipedia gene ID: IDH1-AS1
RefSeq ID: NR_046452
Location (hg19): chr2:209119957-209120918
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 491 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT076636; NR_046452; NR_046452.1
Alternative gene names: ; IDH1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.7932 non-coding 
CPAT coding probability 6.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IDH1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIKFYVE-1:3
4.0 IDH1-AS1:1
4.1 IDH1-AS1:1
5.0 IDH1-AS1:1
5.1 IDH1-AS1:1
5.2 IDH1-AS1:1