Transcript: IDH2-DT:20

Basic information

LNCipedia transcript ID: IDH2-DT:20 
LNCipedia gene ID: IDH2-DT
Location (hg19): chr15:90646498-90676863
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 422 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024004; NONHSAT048367
Alternative gene names: XLOC_011347; linc-SEMA4B


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 4.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IDH2-DT:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SEMA4B-1:1
3.1 lnc-SEMA4B-1:2
4.0 lnc-ZNF710-4:3
4.1 lnc-ZNF710-4:3
5.0 lnc-ZNF710-4:3
5.1 IDH2-DT:10
5.2 IDH2-DT:20