Transcript: IGFBP7-AS1:8

Basic information

LNCipedia transcript ID: IGFBP7-AS1:8 
HGNC Gene Symbol: IGFBP7-AS1    
HGNC Full Gene Name: IGFBP7 antisense RNA 1
Ensembl Gene ID: ENSG00000245067
Ensembl Transcript ID: ENST00000515865
Location (hg19): chr4:58045311-58071676
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 811 bp
Exons: 5
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007537; ENST00000515865.1; RP11-12A1.1-002; OTTHUMT00000364211.2; NONHSAT096548
Alternative gene names: XLOC_003547; linc-LPHN3-8; ENSG00000245067.2; RP11-12A1.1; OTTHUMG00000161143.4; IGFBP7-AS1; ENSG00000245067.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.41 non-coding 
CPAT coding probability 9.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IGFBP7-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POLR2B-1:4
3.1 lnc-POLR2B-1:6
4.0 IGFBP7-AS1:8
4.1 IGFBP7-AS1:8
5.0 IGFBP7-AS1:8
5.1 IGFBP7-AS1:8
5.2 IGFBP7-AS1:8