Transcript: IGSF11-AS1:1

Basic information

LNCipedia transcript ID: IGSF11-AS1:1 
LNCipedia gene ID: IGSF11-AS1
Location (hg19): chr3:118661920-118667071
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1587 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000477009.1; IGSF11-AS1-001; OTTHUMT00000355071.1
Alternative gene names: ENSG00000239877.1; IGSF11-AS1; OTTHUMG00000159386.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.7451 non-coding 
CPAT coding probability 6.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IGSF11-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf30-1:1
4.0 IGSF11-AS1:1
4.1 IGSF11-AS1:1
5.0 IGSF11-AS1:1
5.1 IGSF11-AS1:1
5.2 IGSF11-AS1:1