Transcript: INTS6-AS1:12

Basic information

LNCipedia transcript ID: INTS6-AS1:12 
HGNC Gene Symbol: INTS6-AS1    
HGNC Full Gene Name: INTS6 antisense RNA 1
Ensembl Gene ID: ENSG00000236778
Ensembl Transcript ID: ENST00000600477
Location (hg19): chr13:52028300-52069805
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 572 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT033917; ENST00000600477.1; ENST00000600477.5
Alternative gene names: ENSG00000236778.3; INTS6-AS1; ENSG00000236778.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.6698 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
INTS6-AS1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDFY2-2:12
4.0 INTS6-AS1:12
4.1 INTS6-AS1:12
5.0 INTS6-AS1:12
5.1 INTS6-AS1:12
5.2 INTS6-AS1:12