Transcript: INTS6-AS1:20

Basic information

LNCipedia transcript ID: INTS6-AS1:20 
HGNC Gene Symbol: INTS6-AS1    
HGNC Full Gene Name: INTS6 antisense RNA 1
Ensembl Gene ID: ENSG00000236778
Ensembl Transcript ID: ENST00000595997
Location (hg19): chr13:52028300-52041785
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 432 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT033925; ENST00000595997.1; ENST00000595997.5
Alternative gene names: ENSG00000236778.3; INTS6-AS1; ENSG00000236778.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.1255 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
INTS6-AS1:20 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDFY2-2:20
4.0 INTS6-AS1:20
4.1 INTS6-AS1:20
5.0 INTS6-AS1:20
5.1 INTS6-AS1:20
5.2 INTS6-AS1:20