Transcript: IQCH-AS1:2

Basic information

LNCipedia transcript ID: IQCH-AS1:2 
LNCipedia gene ID: IQCH-AS1
RefSeq ID: NR_040051
Location (hg19): chr15:67695949-67814182
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5960 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT046851; NR_040051; NR_040051.1
Alternative gene names: ; IQCH-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.3483 non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IQCH-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AAGAB-2:8
4.0 IQCH-AS1:2
4.1 IQCH-AS1:2
5.0 IQCH-AS1:2
5.1 IQCH-AS1:2
5.2 IQCH-AS1:2