Transcript: ISM1-AS1:3

Basic information

LNCipedia transcript ID: ISM1-AS1:3 
LNCipedia gene ID: ISM1-AS1
Location (hg19): chr20:13218733-13220301
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 668 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT078684
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -132.566 non-coding 
CPAT coding probability 2.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ISM1-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TASP1-2:3
4.0 ISM1-AS1:3
4.1 ISM1-AS1:3
5.0 ISM1-AS1:3
5.1 ISM1-AS1:3
5.2 ISM1-AS1:3