Transcript: ITFG2-AS1:36

Basic information

LNCipedia transcript ID: ITFG2-AS1:36 
LNCipedia gene ID: ITFG2-AS1
Location (hg19): chr12:2901746-2904044
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2299 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT025475
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.6563 non-coding 
CPAT coding probability 20.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ITFG2-AS1:36 no no no no

Available literature

  1. Schein (2016), Identification of antisense long noncoding RNAs that function as SINEUPs in human cells., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NRIP2-4:2
4.0 lnc-NRIP2-4:2
4.1 lnc-NRIP2-1:16
5.0 lnc-NRIP2-1:16
5.1 ITFG2-AS1:17
5.2 ITFG2-AS1:36