Transcript: ITGA9-AS1:24

Basic information

LNCipedia transcript ID: ITGA9-AS1:24 
LNCipedia gene ID: ITGA9-AS1
Location (hg19): chr3:37861620-37892985
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1043 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT089034
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.2482 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ITGA9-AS1:24 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLCD1-1:19
4.0 ITGA9-AS1:24
4.1 ITGA9-AS1:24
5.0 ITGA9-AS1:24
5.1 ITGA9-AS1:24
5.2 ITGA9-AS1:24