Transcript: ITGA9-AS1:32

Basic information

LNCipedia transcript ID: ITGA9-AS1:32 
LNCipedia gene ID: ITGA9-AS1
Location (hg19): chr3:37850218-37862901
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 672 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000608505.1
Alternative gene names: ENSG00000235257.4; AC093415.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.1617 non-coding 
CPAT coding probability 2.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ITGA9-AS1:32 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLCD1-1:24
4.0 ITGA9-AS1:32
4.1 ITGA9-AS1:32
5.0 ITGA9-AS1:32
5.1 ITGA9-AS1:32
5.2 ITGA9-AS1:32