Transcript: ITGA9-AS1:35

Basic information

LNCipedia transcript ID: ITGA9-AS1:35 
LNCipedia gene ID: ITGA9-AS1
Location (hg19): chr3:37845302-37850447
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 446 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT089025
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 193.0035 coding 
CPAT coding probability 71.06% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ITGA9-AS1:35 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLCD1-1:25
4.0 ITGA9-AS1:35
4.1 ITGA9-AS1:35
5.0 ITGA9-AS1:35
5.1 ITGA9-AS1:35
5.2 ITGA9-AS1:35