Transcript: ITPR1-DT:17

Basic information

LNCipedia transcript ID: ITPR1-DT:17 
LNCipedia gene ID: ITPR1-DT
Location (hg19): chr3:4521579-4534821
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 375 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006399; NONHSAT087628
Alternative gene names: XLOC_003021; linc-SUMF1-4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ITPR1-DT:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SUMF1-1:2
3.1 lnc-SUMF1-1:2
4.0 ITPR1-AS1:4
4.1 ITPR1-AS1:4
5.0 ITPR1-AS1:4
5.1 ITPR1-DT:9
5.2 ITPR1-DT:17