Transcript: JARID2-AS1:2

Basic information

LNCipedia transcript ID: JARID2-AS1:2 
LNCipedia gene ID: JARID2-AS1
Location (hg19): chr6:15248049-15248887
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 474 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT107868
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -119.5042 non-coding 
CPAT coding probability 9.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
JARID2-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DTNBP1-3:2
4.0 JARID2-AS1:2
4.1 JARID2-AS1:2
5.0 JARID2-AS1:2
5.1 JARID2-AS1:2
5.2 JARID2-AS1:2