Transcript: KBTBD11-OT1:3

Basic information

LNCipedia transcript ID: KBTBD11-OT1:3 
LNCipedia gene ID: KBTBD11-OT1
RefSeq ID: NR_126346
Location (hg19): chr8:1919563-1924610
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 781 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000518539.1; RP11-439C15.2-001; OTTHUMT00000374598.1; NR_126346; NR_126346.1
Alternative gene names: ENSG00000253696.1; RP11-439C15.2; OTTHUMG00000163627.1; ; KBTBD11-OT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -228.9413 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KBTBD11-OT1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KBTBD11-1:1
4.0 KBTBD11-OT1:3
4.1 KBTBD11-OT1:3
5.0 KBTBD11-OT1:3
5.1 KBTBD11-OT1:3
5.2 KBTBD11-OT1:3