Transcript: KCNMB2-AS1:2

Basic information

LNCipedia transcript ID: KCNMB2-AS1:2 
LNCipedia gene ID: KCNMB2-AS1
RefSeq ID: NR_126560
Location (hg19): chr3:178243255-178578193
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2055 bp
Exons: 8
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126560; NR_126560.1
Alternative gene names: RP11-385J1.2; KCNMB2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -23.0489 non-coding 
CPAT coding probability 16.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCNMB2-AS1:2 no no no no

Available literature

  1. Wang (2015), Detection of long-chain non-encoding RNA differential expression in non-small cell lung cancer by microarray analysis and preliminary verification., Mol Med Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZMAT3-2:8
4.0 KCNMB2-AS1:2
4.1 KCNMB2-AS1:2
5.0 KCNMB2-AS1:2
5.1 KCNMB2-AS1:2
5.2 KCNMB2-AS1:2