Transcript: KCNMB2-AS1:9

Basic information

LNCipedia transcript ID: KCNMB2-AS1:9 
LNCipedia gene ID: KCNMB2-AS1
Location (hg19): chr3:178466749-178519729
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 425 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1023:1
Alternative gene names: RP11-385J1.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -143.7816 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KCNMB2-AS1:9 no no no no

Available literature

  1. Wang (2015), Detection of long-chain non-encoding RNA differential expression in non-small cell lung cancer by microarray analysis and preliminary verification., Mol Med Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 KCNMB2-AS1:9
4.1 KCNMB2-AS1:9
5.0 KCNMB2-AS1:9
5.1 KCNMB2-AS1:9
5.2 KCNMB2-AS1:9