Transcript: KDM4A-AS1:10

Basic information

LNCipedia transcript ID: KDM4A-AS1:10 
LNCipedia gene ID: KDM4A-AS1
RefSeq ID: NR_033827
Location (hg19): chr1:44165395-44173012
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1574 bp
Exons: 5
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_033827.1
Alternative gene names: KDM4A-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.8508 non-coding 
CPAT coding probability 9.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KDM4A-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 KDM4A-AS1:10
5.1 KDM4A-AS1:10
5.2 KDM4A-AS1:10