Transcript: KDM4A-AS1:8

Basic information

LNCipedia transcript ID: KDM4A-AS1:8 
LNCipedia gene ID: KDM4A-AS1
Location (hg19): chr1:44160518-44173009
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 579 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236200.1|FTMT20100084311.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -150.0314 non-coding 
CPAT coding probability 6.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KDM4A-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 KDM4A-AS1:8
5.0 KDM4A-AS1:8
5.1 KDM4A-AS1:8
5.2 KDM4A-AS1:8