Transcript: KIF25-AS1:10

Basic information

LNCipedia transcript ID: KIF25-AS1:10 
LNCipedia gene ID: KIF25-AS1
Location (hg19): chr6:168377262-168379053
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 275 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000441716
Alternative gene names: ENSG00000235994; RP3-470B24.5; HGC6.1.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.3997 non-coding 
CPAT coding probability 2.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KIF25-AS1:10 no no no no

Available literature

  1. Minaguchi (1999), Complete DNA sequence and characterization of a 330-kb VNTR-rich region on chromosome 6q27 that is commonly deleted in ovarian cancer., DNA Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FRMD1-2:1
3.1 lnc-FRMD1-2:2
4.0 KIF25-AS1:10
4.1 KIF25-AS1:10
5.0 KIF25-AS1:10
5.1 KIF25-AS1:10
5.2 KIF25-AS1:10