Transcript: KIF25-AS1:5

Basic information

LNCipedia transcript ID: KIF25-AS1:5 
HGNC Gene Symbol: KIF25-AS1    
HGNC Full Gene Name: KIF25 antisense RNA 1
Ensembl Gene ID: ENSG00000229921
Ensembl Transcript ID: ENST00000414364
Location (hg19): chr6:168394852-168397757
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1420 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000414364; ENST00000414364.1; KIF25-AS1-001; OTTHUMT00000043180.2; NONHSAT116131
Alternative gene names: ENSG00000229921; NCRNA00300; ENSG00000229921.2; KIF25-AS1; OTTHUMG00000016036.2; ENSG00000229921.6; HGC6.1.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.1714 non-coding 
CPAT coding probability 63.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
KIF25-AS1:5 no no no no

Available literature

  1. Minaguchi (1999), Complete DNA sequence and characterization of a 330-kb VNTR-rich region on chromosome 6q27 that is commonly deleted in ovarian cancer., DNA Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FRMD1-1:4
3.1 lnc-FRMD1-1:3
4.0 KIF25-AS1:5
4.1 KIF25-AS1:5
5.0 KIF25-AS1:5
5.1 KIF25-AS1:5
5.2 KIF25-AS1:5