Transcript: KIF26B-AS1:3

Basic information

LNCipedia transcript ID: KIF26B-AS1:3 
HGNC Gene Symbol: KIF26B-AS1    
HGNC Full Gene Name: KIF26B antisense RNA 1
Ensembl Gene ID: ENSG00000232192
Ensembl Transcript ID: ENST00000446321
Location (hg19): chr1:245369746-245397803
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 810 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000446321.1; RP11-62I21.1-001; OTTHUMT00000096656.1; NONHSAT010680
Alternative gene names: ENSG00000232192.1; RP11-62I21.1; OTTHUMG00000040077.1; AL592103.1; KIF26B-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.9086 non-coding 
CPAT coding probability 6.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KIF26B-AS1:3 yes no no no

Available literature

  1. Kim (2017), Epidermal long non-coding RNAs are regulated by ultraviolet irradiation., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HNRNPU-4:1
4.0 lnc-HNRNPU-4:1
4.1 lnc-HNRNPU-4:1
5.0 lnc-HNRNPU-4:1
5.1 KIF26B-AS1:2
5.2 KIF26B-AS1:3