Transcript: KTN1-AS1:2

Basic information

LNCipedia transcript ID: KTN1-AS1:2 
HGNC Gene Symbol: KTN1-AS1    
HGNC Full Gene Name: KTN1 antisense RNA 1
Ensembl Gene ID: ENSG00000186615
Ensembl Transcript ID: ENST00000535211
Location (hg19): chr14:56042905-56046814
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1354 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000535211; ENST00000535211.1
Alternative gene names: ENSG00000186615; ENSG00000186615.6; KTN1-AS1; ENSG00000186615.10; ; MYCLo-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.1778 non-coding 
CPAT coding probability 3.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
KTN1-AS1:2 no no no no

Available literature

  1. Kim (2015), Role of MYC-regulated long noncoding RNAs in cell cycle regulation and tumorigenesis., J. Natl. Cancer Inst.
  2. Hart (2014), MYC regulates the non-coding transcriptome., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TBPL2-1:2
3.1 lnc-TBPL2-1:2
4.0 KTN1-AS1:2
4.1 KTN1-AS1:2
5.0 KTN1-AS1:2
5.1 KTN1-AS1:2
5.2 KTN1-AS1:2